# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-
# vi: set ft=python sts=4 ts=4 sw=4 et:
# -*- coding: utf-8 -*-
"""MRTrix3 provides software tools to perform various types of diffusion MRI analyses."""
from .connectivity import BuildConnectome, LabelConfig, LabelConvert
from .preprocess import (
    ACTPrepareFSL,
    DWIBiasCorrect,
    DWIDenoise,
    DWIPreproc,
    MRDeGibbs,
    ReplaceFSwithFIRST,
    ResponseSD,
)
from .reconst import ConstrainedSphericalDeconvolution, EstimateFOD, FitTensor
from .tracking import Tractography
from .utils import (
    TCK2VTK,
    BrainMask,
    ComputeTDI,
    DWIExtract,
    Generate5tt,
    Mesh2PVE,
    MRCat,
    MRConvert,
    MRMath,
    MRResize,
    MRTransform,
    SH2Amp,
    SHConv,
    TensorMetrics,
    TransformFSLConvert,
)