3 XdX@sbdZddlZddlZddlZddlmZejdedddZd d Z Gd d d e Z d dZ dS)a The minc module provides classes for interfacing with the `MINC `_ command line tools. This module was written to work with MINC version 2.2.00. Author: Carlo Hamalainen http://carlo-hamalainen.net N) CommandLinealways)categorycCs tjdk S)z/Returns True if and only if MINC is installed.'N)InfoversionrrM/var/www/html/virt/lib/python3.6/site-packages/nipype/interfaces/minc/base.py check_mincsr cCst S)z4Returns True if and only if MINC is *not* installed.)r rrrr no_mincsr c@seZdZdZeddZdS)rz^Handle MINC version information. version refers to the version of MINC on the system c Csytddddj}Wntk r*dSX|jj}dd}dd }d d }d d }ddddd}xT|jdD]F}x@d|fd|fd|fd|fgD] \}} | |dk r| |||<qWqnW|S)zCheck for minc version on the system Parameters ---------- None Returns ------- version : dict Version number as dict or None if MINC not found Zmincinfoz-versionZ allatonce)commandargsZterminal_outputNcSsd|kr|jddjSdS)Nprogram:)splitstrip)srrr read_program_version<sz*Info.version..read_program_versioncSsd|kr|jddjSdS)Nlibmincrr)rr)rrrr read_libminc_versionAsz*Info.version..read_libminc_versioncSs(d|kr$dj|jdddjSdS)Nnetcdf rr)joinrr)rrrr read_netcdf_versionFsz)Info.version..read_netcdf_versioncSsd|kr|jddjSdS)NZHDF5rr)rr)rrrr read_hdf5_versionKsz'Info.version..read_hdf5_version)mincrrhdf5 rrrr)rrunIOErrorZruntimestdoutr) Zcloutoutrrrrversionslnamefrrr r%s( z Info.versionN)__name__ __module__ __qualname____doc__ staticmethodrrrrr rsrcCstjj|dd}dd|D}tjj|}tj}|dkrptjjtjj|tjj|ddd|dStjjtjj||d|dSdS)a Try to work out a sensible name given a set of files that have been combined in some way (e.g. averaged). If we can't work out a sensible prefix, we use the first filename in the list. Examples -------- >>> from nipype.interfaces.minc.base import aggregate_filename >>> f = aggregate_filename(['/tmp/foo1.mnc', '/tmp/foo2.mnc', '/tmp/foo3.mnc'], 'averaged') >>> os.path.split(f)[1] # This has a full path, so just check the filename. 'foo_averaged.mnc' >>> f = aggregate_filename(['/tmp/foo1.mnc', '/tmp/blah1.mnc'], 'averaged') >>> os.path.split(f)[1] # This has a full path, so just check the filename. 'foo1_averaged.mnc' rcSs(g|] }tjjtjj|ddqS)rr)ospathsplitextr).0xrrr tsz&aggregate_filename.._z.mncN)r,r-r commonprefixgetcwdabspathrr.)filesZ new_suffixr-names common_prefixrrr aggregate_filename_s &r:) r*r,os.pathwarningsbaserfilterwarnings UserWarningr r objectrr:rrrr  s @